ISMB 1996 - PDF Preprint Papers

ISMB 1996

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ISMB
1996

203views Computational Biology» more ISMB 1996»

Finding Genes in DNA Using Decision Trees and Dynamic Programming

13 years 5 months ago

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This study demonstratesthe use of decision tree classifiers as the basis for a general gene-finding system. The system uses a dynamic programmingalgorithm that. finds the optimal ...

Steven Salzberg, Xin Chen, John Henderson, Kenneth...

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Id	Views	Title	Status

1	203	Finding Genes in DNA Using Decision Trees and Dynamic Programming	claim
2	155	Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model	claim
3	149	Genome-Scale DNA Sequence Recognition by Hybridization to Short Oligomers	claim
4	144	Refining Neural Network Predictions for Helical Transmembrane Proteins by Dynamic Programming	claim
5	142	A Probabilistic Classification System for Predicting the Cellular Localization Sites of Proteins	claim
6	139	A Knowledge-Based Method for Protein Structure Refinement and Prediction	claim
7	138	Discovering Empirically Conserved Amino Acid Substitution Groups in Databases of Protein Families	claim
8	124	Characterization of Prokaryotic and Eukaryotic Promoters Using Hidden Markov Models	claim
9	124	Compact Encoding Strategies for DNA Sequence Similarity Search	claim
10	120	A Grammar-Based Unification of Several Alignment and Folding Algorithms	claim
11	115	GeneFisher-Software Support for the Detection of Postulated Genes	claim
12	112	Ontological Foundations for Biology Knowledge Models	claim
13	110	The Megaprior Heuristic for Discovering Protein Sequence Patterns	claim
14	109	Parameterization Studies for the SAM and HMMER Methods of Hidden Markov Model Generation	claim
15	102	Gene Prediction by Pattern Recognition and Homology Search	claim
16	102	Inferring Relatedness of a Macromolecule to a Sequence Database Without Sequencing	claim
17	101	The Mathematical Model of Subtractive Hybridization and Its Practical Application	claim
18	100	A Generalized Hidden Markov Model for the Recognition of Human Genes in DNA	claim
19	99	HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae	claim
20	98	Improving the Quality of Automatic DNA Sequence Assembly Using Fluorescent Trace-Data Classifications	claim
21	90	Discovering Patterns and Subfamilies in Biosequences	claim
22	86	A Top-Down Approach to Whole Genome Visualization	claim

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