Sciweavers

Share
NAR
2011

AGRIS: the Arabidopsis Gene Regulatory Information Server, an update

8 years 1 months ago
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update
The Arabidopsis Gene Regulatory Information Server (AGRIS; http://arabidopsis.med.ohio-state .edu/) provides a comprehensive resource for gene regulatory studies in the model plant Arabidopsis thaliana. Three interlinked databases, AtTFDB, AtcisDB and AtRegNet, furnish comprehensive and updated information on transcription factors (TFs), predicted and experimentally verified cis-regulatory elements (CREs) and their interactions, respectively. In addition to significant contributions in the identification of the entire set of TF–DNA interactions, which are the key to understand the gene regulatory networks that govern Arabidopsis gene expression, tools recently incorporated into AGRIS include the complete set of words length 5–15 present in the Arabidopsis genome and the integration of AtRegNet with visualization tools, such as the recently developed ReIN application. All the information in AGRIS is publicly available and downloadable upon registration.
Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle K
Added 16 Sep 2011
Updated 16 Sep 2011
Type Journal
Year 2011
Where NAR
Authors Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle Kurz, Xiaoyu Liang, Lonnie Welch, Erich Grotewold
Comments (0)
books