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RECOMB
2004
Springer

Finding approximate tandem repeats in genomic sequences

9 years 9 months ago
Finding approximate tandem repeats in genomic sequences
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range of definitions of approximate tandem repeats. The ideas and methods underlying the algorithm are described and its effectiveness on genomic data is demonstrated. Categories and Subject Descriptors J.3 [Computer Applications]: Life and medical sciences; G.3.8 [Mathematics of Computing]: Probability and statistics--Probabilistic algorithms General Terms Algorithms, Experimentation Keywords tandem repeats, trf, teiresias, atr, pattern discovery, DNA repeats, DNA satellites
Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Ge
Added 03 Dec 2009
Updated 03 Dec 2009
Type Conference
Year 2004
Where RECOMB
Authors Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Geiger
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