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LSGRID
2004
Springer

Grid Portal Interface for Interactive Use and Monitoring of High-Throughput Proteome Annotation

12 years 7 months ago
Grid Portal Interface for Interactive Use and Monitoring of High-Throughput Proteome Annotation
High-throughput proteome annotation refers to the activity of extracting information from all proteins in a particular organism using bioinformatics software on a high performance computing platform such as the grid. The Encyclopedia of Life (EOL) project [1] aims to catalog all proteins in all species for public benefits using an Integrative Genome Annotation Pipeline [2] (iGAP). The intrinsic complexity of the pipeline makes iGAP an ideal life sciences application to drive grid software development. It is a flagship application for the TeraGrid project [3]. The deployment of iGAP on the grid using grid middleware and mediator software has been described previously [4]. The heterogeneous and distributed computing environment on the grid requires an interactive user interface where jobs may be submitted and monitored. Here we describe our international collaborative effort in creating a grid To whom correspondence should be addressed. Phone 858-822-1079, Fax 858-8224767 pp. 53–67,...
Atif Shahab, Danny Chuon, Toyotaro Suzumura, Wilfr
Added 02 Jul 2010
Updated 02 Jul 2010
Type Conference
Year 2004
Where LSGRID
Authors Atif Shahab, Danny Chuon, Toyotaro Suzumura, Wilfred W. Li, Robert W. Byrnes, Kouji Tanaka, Larry Ang, Satoshi Matsuoka, Philip E. Bourne, Mark A. Miller, Peter W. Arzberger
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