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GECCO
2007
Springer

Hardware acceleration of multi-deme genetic algorithm for the application of DNA codeword searching

9 years 3 months ago
Hardware acceleration of multi-deme genetic algorithm for the application of DNA codeword searching
A large and reliable DNA codeword library is key to the success of DNA based computing. Searching for sets of reliable DNA codewords is an NP-hard problem, which can take days on stateof-art high performance cluster computers. This work presents a hybrid architecture that consists of a general purpose microprocessor and a hardware accelerator for accelerating the multi-deme genetic algorithm (GA) for the application of DNA codeword searching. The presented architecture provides more than 1000X speed-up compared to a software only implementation. A code extender that uses exhaustive search to
Qinru Qiu, Daniel J. Burns, Prakash Mukre, Qing Wu
Added 16 Aug 2010
Updated 16 Aug 2010
Type Conference
Year 2007
Where GECCO
Authors Qinru Qiu, Daniel J. Burns, Prakash Mukre, Qing Wu
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