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ECEASST
2010
13 years 3 months ago
Self Organized Swarms for cluster preserving Projections of high-dimensional Data
: A new approach for topographic mapping, called Swarm-Organized Projection (SOP) is presented. SOP has been inspired by swarm intelligence methods for clustering and is similar to...
Alfred Ultsch, Lutz Herrmann
BMCBI
2006
180views more  BMCBI 2006»
13 years 5 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
NAR
2006
119views more  NAR 2006»
13 years 5 months ago
ChloroplastDB: the Chloroplast Genome Database
The Chloroplast Genome Database (ChloroplastDB) is an interactive, web-based database for fully sequenced plastid genomes, containing genomic, protein, DNA and RNA sequences, gene...
Liying Cui, Narayanan Veeraraghavan, Alexander Ric...
BMCBI
2005
122views more  BMCBI 2005»
13 years 5 months ago
Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein
Background: Recognition codes for protein-DNA interactions typically assume that the interacting positions contribute additively to the binding energy. While this is known to not ...
Jiajian Liu, Gary D. Stormo
JGAA
2007
135views more  JGAA 2007»
13 years 5 months ago
Challenging Complexity of Maximum Common Subgraph Detection Algorithms: A Performance Analysis of Three Algorithms on a Wide Dat
Graphs are an extremely general and powerful data structure. In pattern recognition and computer vision, graphs are used to represent patterns to be recognized or classified. Det...
Donatello Conte, Pasquale Foggia, Mario Vento