6 search results - page 1 / 2 » A CLP Approach to the Protein Side-Chain Placement Problem |
CP
2001
Springer
13 years 8 months ago
2001
Springer
Abstract. Selecting conformations for side-chains is an important subtask in building three-dimensional protein models. Side-chain placement is a difficult problem because of the l...
CEC
2009
IEEE
13 years 9 months ago
2009
IEEE
— This work presents a methodology for the application of a parallel genetic algorithm (PGA) to the problem of protein folding prediction, using the 3DHP-Side Chain model. This m...
WABI
2005
Springer
13 years 9 months ago
2005
Springer
Abstract. Protein design software places amino acid side chains by precomputing rotamer-pair energies and optimizing rotamer placement. If the software optimizes by rapid stochasti...
CORR
2010
Springer
13 years 3 months ago
2010
Springer
Abstract. The paper investigates a novel approach, based on Constraint Logic Programming (CLP), to predict the 3D conformation of a protein via fragments assembly. The fragments ar...
JCB
2000
13 years 4 months ago
2000
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...