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IPPS
2005
IEEE
10 years 7 months ago
A Case Study on Pattern-Based Systems for High Performance Computational Biology
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Weiguo Liu, Bertil Schmidt
CLUSTER
2003
IEEE
10 years 6 months ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
JSS
2011
126views more  JSS 2011»
9 years 4 months ago
A novel statistical time-series pattern based interval forecasting strategy for activity durations in workflow systems
Forecasting workflow activity durations is of great importance to support satisfactory QoS in workflow systems. Traditionally, a workflow system is often designed to facilitate the...
Xiao Liu, Zhiwei Ni, Dong Yuan, Yuan-Chun Jiang, Z...
BMCBI
2004
153views more  BMCBI 2004»
10 years 1 months ago
Computational protein biomarker prediction: a case study for prostate cancer
Background: Recent technological advances in mass spectrometry pose challenges in computational mathematics and statistics to process the mass spectral data into predictive models...
Michael Wagner, Dayanand N. Naik, Alex Pothen, Sri...
DAC
2000
ACM
11 years 2 months ago
MorphoSys: case study of a reconfigurable computing system targeting multimedia applications
In this paper, we present a case study for the design, programming and usage of a reconfigurable system-on-chip, MorphoSys, which is targeted at computation-intensive applications...
Hartej Singh, Guangming Lu, Eliseu M. Chaves Filho...
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