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» A Comparative Study of Variable Elimination and Arc Reversal...
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AAAI
2011
12 years 5 months ago
Mean Field Inference in Dependency Networks: An Empirical Study
Dependency networks are a compelling alternative to Bayesian networks for learning joint probability distributions from data and using them to compute probabilities. A dependency ...
Daniel Lowd, Arash Shamaei
BMCBI
2005
178views more  BMCBI 2005»
13 years 5 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
IJON
2010
138views more  IJON 2010»
13 years 3 months ago
A dynamic Bayesian network to represent discrete duration models
Originally devoted to specific applications such as biology, medicine and demography, duration models are now widely used in economy, finance or reliability. Recent works in var...
Roland Donat, Philippe Leray, Laurent Bouillaut, P...
BMCBI
2007
197views more  BMCBI 2007»
13 years 5 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
BMCBI
2008
201views more  BMCBI 2008»
13 years 5 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...