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BMCBI
2008
146views more  BMCBI 2008»
13 years 5 months ago
Rank-based edge reconstruction for scale-free genetic regulatory networks
Background: The reconstruction of genetic regulatory networks from microarray gene expression data has been a challenging task in bioinformatics. Various approaches to this proble...
Guanrao Chen, Peter Larsen, Eyad Almasri, Yang Dai
BMCBI
2008
200views more  BMCBI 2008»
13 years 5 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
BMCBI
2007
152views more  BMCBI 2007»
13 years 5 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
KDD
2004
ACM
209views Data Mining» more  KDD 2004»
14 years 5 months ago
A data mining approach to modeling relationships among categories in image collection
This paper proposes a data mining approach to modeling relationships among categories in image collection. In our approach, with image feature grouping, a visual dictionary is cre...
Ruofei Zhang, Zhongfei (Mark) Zhang, Sandeep Khanz...
BMCBI
2010
111views more  BMCBI 2010»
13 years 5 months ago
Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays
Background: Current commercial high-density oligonucleotide microarrays can hold millions of probe spots on a single microscopic glass slide and are ideal for studying the transcr...
Hedda Høvik, Tsute Chen