Background: Oligonucleotide frequencies were shown to be conserved signatures for bacterial genomes, however, the underlying constraints have yet not been resolved in detail. In t...
In this article we present Supervised Semantic Indexing (SSI) which defines a class of nonlinear (quadratic) models that are discriminatively trained to directly map from the word...
Bing Bai, Jason Weston, David Grangier, Ronan Coll...
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...