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» A Low-complexity Distance for DNA Strings
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FUIN
2006
47views more  FUIN 2006»
13 years 4 months ago
A Low-complexity Distance for DNA Strings
We exhibit a low-complexity but non-trivial distance for strings to be used in biology.
Liviu Petrisor Dinu, Andrea Sgarro
INFORMATICALT
2010
142views more  INFORMATICALT 2010»
13 years 3 months ago
Complexity Estimation of Genetic Sequences Using Information-Theoretic and Frequency Analysis Methods
The genetic information in cells is stored in DNA sequences, represented by a string of four letters, each corresponding to a definite type of nucleotides. Genomic DNA sequences a...
Robertas Damasevicius
IPPS
2002
IEEE
13 years 9 months ago
Approximate String Matching in LDAP Based on Edit Distance
As the E-Commerce rapidly grows up, searching data is almost necessary in every application. Approximate string matching problems play a very important role to search with errors....
Chi-Chien Pan, Kai-Hsiang Yang, Tzao-Lin Lee
TSMC
2008
93views more  TSMC 2008»
13 years 4 months ago
Selection of DNA Markers
Given a genome, i.e., a long string over a fixed finite alphabet, the problem is to find short (dis)similar substrings. This computationally intensive task has many biological appl...
Hendrik Jan Hoogeboom, Walter A. Kosters, Jeroen F...
ISPAN
1997
IEEE
13 years 9 months ago
RMESH Algorithms for Parallel String Matching
Abstract- String matching problem received much attention over the years due to its importance in various applications such as text/file comparison, DNA sequencing, search engines,...
Hsi-Chieh Lee, Fikret Erçal