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» A Mechanization of Phylogenetic Trees
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SAC
2006
ACM
13 years 11 months ago
Protein classification using transductive learning on phylogenetic profiles
Phylogenetic profiles of proteins − strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes − have recently been used to iden...
Roger A. Craig, Li Liao
IJDMB
2007
110views more  IJDMB 2007»
13 years 5 months ago
Transductive learning with EM algorithm to classify proteins based on phylogenetic profiles
: Phylogenetic profiles of proteins  strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes  have recently been used to id...
Roger A. Craig, Li Liao
CORR
2007
Springer
165views Education» more  CORR 2007»
13 years 5 months ago
Comparison of Tree-Child Phylogenetic Networks
Abstract—Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization...
Gabriel Cardona, Francesc Rosselló, Gabriel...
JCB
1998
105views more  JCB 1998»
13 years 4 months ago
Constructing and Counting Phylogenetic Invariants
Abstract. The method of invariants is an approach to the problem of reconstructing the phylogenetic tree of a collection of m taxa using nucleotide sequence data. Models for the re...
Steven N. Evans, Xiaowen Zhou
BMCBI
2004
126views more  BMCBI 2004»
13 years 5 months ago
Visualising very large phylogenetic trees in three dimensional hyperbolic space
Background: Common existing phylogenetic tree visualisation tools are not able to display readable trees with more than a few thousand nodes. These existing methodologies are base...
Timothy Hughes, Young Hyun, David A. Liberles