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SEMWEB
2007
Springer
13 years 11 months ago
SODA: an OWL-DL based Ontology Matching System
This paper describes SODA a novel ontology alignment method for the OWL-DL format. SODA uses a new approach that consists in computing local and semantic similarities among ontolog...
Sami Zghal, Sadok Ben Yahia, Engelbert Mephu Nguif...
BMCBI
2005
125views more  BMCBI 2005»
13 years 5 months ago
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
Amarendran R. Subramanian, Jan Weyer-Menkhoff, Mic...
JPDC
2006
112views more  JPDC 2006»
13 years 5 months ago
Large scale multiple sequence alignment with simultaneous phylogeny inference
Multiple sequence alignment (MSA) and phylogenetic tree reconstruction are one of the most important problems in the computational biology. While both these problems are of great ...
Gilles Parmentier, Denis Trystram, Jaroslaw Zola
CVPR
2008
IEEE
14 years 7 months ago
Enforcing convexity for improved alignment with constrained local models
Constrained local models (CLMs) have recently demonstrated good performance in non-rigid object alignment/tracking in comparison to leading holistic approaches (e.g., AAMs). A maj...
Yang Wang, Simon Lucey, Jeffrey F. Cohn
BMCBI
2010
104views more  BMCBI 2010»
13 years 5 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton