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BMCBI
2011
10 years 8 months ago
A Platform for Processing Expression of Short Time Series (PESTS)
Background: Time course microarray profiles examine the expression of genes over a time domain. They are necessary in order to determine the complete set of genes that are dynamic...
Anshu Sinha, Marianthi Markatou
BMCBI
2005
246views more  BMCBI 2005»
11 years 1 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
BMCBI
2006
123views more  BMCBI 2006»
11 years 1 months ago
Permutation test for periodicity in short time series data
Background: Periodic processes, such as the circadian rhythm, are important factors modulating and coordinating transcription of genes governing key metabolic pathways. Theoretica...
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimbl...
IDA
2002
Springer
11 years 1 months ago
A framework for modelling virus gene expression data
Short, high-dimensional, Multivariate Time Series (MTS) data are common in many fields such as medicine, finance and science, and any advance in modelling this kind of data would b...
Paul Kellam, Xiaohui Liu, Nigel J. Martin, Christi...
ICC
2011
IEEE
237views Communications» more  ICC 2011»
10 years 1 months ago
Reorganized and Compact DFA for Efficient Regular Expression Matching
—Regular expression matching has become a critical yet challenging technique in content-aware network processing, such as application identification and deep inspection. To meet ...
Kai Wang, Yaxuan Qi, Yibo Xue, Jun Li
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