10 search results - page 1 / 2 » A Randomized Numerical Aligner (rNA) |
LATA
2010
Springer
13 years 9 months ago
2010
Springer
With the advent of new sequencing technologies able to produce an enormous quantity of short genomic sequences, new tools able to search for them inside a references sequence genom...
BMCBI
2007
13 years 4 months ago
2007
Background: Multiple sequence alignment is fundamental. Exponential growth in computation time appears to be inevitable when an optimal alignment is required for many sequences. E...
JCB
2007
13 years 4 months ago
2007
Long-range correlations in genomic base composition are a ubiquitous statistical feature among many eukaryotic genomes. In this article, these correlations are shown to substantia...
ICASSP
2011
IEEE
12 years 8 months ago
2011
IEEE
We have recently proposed an EM-style algorithm to optimize log-linear models with hidden variables. In this paper, we use this algorithm to optimize a hidden conditional random ï...
HPDC
2010
IEEE
13 years 5 months ago
2010
IEEE
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...