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ENTCS
2008
98views more  ENTCS 2008»
13 years 5 months ago
A Rewriting Calculus for Multigraphs with Ports
In this paper, we define labeled multigraphs with ports, a graph model which specifies connection points for nodes and allows multiple edges and loops. The dynamic evolution of th...
Oana Andrei, Hélène Kirchner
SYNASC
2007
IEEE
119views Algorithms» more  SYNASC 2007»
13 years 11 months ago
Graph Rewriting and Strategies for Modeling Biochemical Networks
In this paper, we present a rewriting framework for modeling molecular complexes, biochemical reaction rules, and generation of biochemical networks based on the representation of...
Oana Andrei, Hélène Kirchner