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ICPPW
2009
IEEE
13 years 2 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
ICONIP
2008
13 years 5 months ago
Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting
Mass spectrometry (MS) is a key technique for the analysis and identification of proteins. A prediction of spectrum peak intensities from pre computed molecular features would pave...
Alexandra Scherbart, Wiebke Timm, Sebastian Bö...
BMCBI
2007
149views more  BMCBI 2007»
13 years 4 months ago
SAMPI: Protein Identification with Mass Spectra Alignments
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...
Hans-Michael Kaltenbach, Andreas Wilke, Sebastian ...
ICANN
2007
Springer
13 years 8 months ago
Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping
In todays bioinformatics, Mass spectrometry (MS) is the key technique for the identification of proteins. A prediction of spectrum peak intensities from pre computed molecular feat...
Alexandra Scherbart, Wiebke Timm, Sebastian Bö...
BMCBI
2008
158views more  BMCBI 2008»
13 years 4 months ago
LC-MSsim - a simulation software for liquid chromatography mass spectrometry data
Background: Mass Spectrometry coupled to Liquid Chromatography (LC-MS) is commonly used to analyze the protein content of biological samples in large scale studies. The data resul...
Ole Schulz-Trieglaff, Nico Pfeifer, Clemens Gr&oum...