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BMCBI
2010
148views more  BMCBI 2010»
13 years 6 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
SODA
2010
ACM
171views Algorithms» more  SODA 2010»
14 years 3 months ago
Coresets and Sketches for High Dimensional Subspace Approximation Problems
We consider the problem of approximating a set P of n points in Rd by a j-dimensional subspace under the p measure, in which we wish to minimize the sum of p distances from each p...
Dan Feldman, Morteza Monemizadeh, Christian Sohler...
BMCBI
2006
137views more  BMCBI 2006»
13 years 6 months ago
Bounded search for de novo identification of degenerate cis-regulatory elements
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
CORR
2007
Springer
95views Education» more  CORR 2007»
13 years 6 months ago
Scheduling in Data Intensive and Network Aware (DIANA) Grid Environments
In Grids scheduling decisions are often made on the basis of jobs being either data or computation intensive: in data intensive situations jobs may be pushed to the data and in co...
Richard McClatchey, Ashiq Anjum, Heinz Stockinger,...