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    » A comparison of Affymetrix gene expression arrays
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    BMCBI
    2007
    104views more  BMCBI 2007»
    A comparison of Affymetrix gene expression arrays
    13 years 5 months ago
    A comparison of Affymetrix gene expression arrays
    Download  www.biomedcentral.com
    Background: Affymetrix GeneChips™ are an important tool in many facets of biological research. Recently, notable design changes to the chips have been made. In this study, we us...
    Mark D. Robinson, Terence P. Speed
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    BIOINFORMATICS
    2006
    120views more  BIOINFORMATICS 2006»
    Comparison of Affymetrix GeneChip expression measures
    13 years 5 months ago
    Comparison of Affymetrix GeneChip expression measures
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    Motivation: In the Affymetrix GeneChip system, preprocessing occurs before one obtains expression level measurements. Because the number of competing preprocessing methods was lar...
    Rafael A. Irizarry, Zhijin Wu, Harris A. Jaffee
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    BMCBI
    2005
    121views more  BMCBI 2005»
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
    13 years 4 months ago
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
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    Background: A critical step in processing oligonucleotide microarray data is combining the information in multiple probes to produce a single number that best captures the express...
    Kerby Shedden, Wei Chen, Rork Kuick, Debashis Ghos...
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    BMCBI
    2008
    126views more  BMCBI 2008»
    Methods for evaluating gene expression from Affymetrix microarray datasets
    13 years 5 months ago
    Methods for evaluating gene expression from Affymetrix microarray datasets
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    Background: Affymetrix high density oligonucleotide expression arrays are widely used across all fields of biological research for measuring genome-wide gene expression. An import...
    Ning Jiang, Lindsey J. Leach, Xiaohua Hu, Elena Po...
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    BMCBI
    2010
    99views more  BMCBI 2010»
    Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays
    13 years 5 months ago
    Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays
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    Background: Alternative splicing is an important mechanism that increases protein diversity and functionality in higher eukaryotes. Affymetrix exon arrays are a commercialized pla...
    Yi Qu, Fei He, Yuchen Chen
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