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BMCBI
2011
12 years 9 months ago
SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
Background: The popularity of massively parallel exome and transcriptome sequencing projects demands new data mining tools with a comprehensive set of features to support a wide r...
Xutao Deng
SIGCSE
2002
ACM
149views Education» more  SIGCSE 2002»
13 years 5 months ago
A comprehensive project for CS2: combining key data structures and algorithms into an integrated web browser and search engine
We present our experience using a large, real-world application as a course project for the second half of the semester of a CS2 course. Our primary goal for the project was to cr...
Tia Newhall, Lisa Meeden
NAR
2011
191views Computer Vision» more  NAR 2011»
12 years 9 months ago
The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
Qifang Xu, Roland L. Dunbrack Jr.
NAR
2011
157views Computer Vision» more  NAR 2011»
12 years 9 months ago
PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database
We updated the plant transcription factor (TF) database to version 2.0 (PlantTFDB 2.0, http:// planttfdb.cbi.pku.edu.cn) which contains 53 319 putative TFs predicted from 49 speci...
He Zhang, Jinpu Jin, Liang Tang, Yi Zhao, Xiaochen...
NAR
2008
122views more  NAR 2008»
13 years 5 months ago
PlantTFDB: a comprehensive plant transcription factor database
Transcription factors (TFs) play key roles in controlling gene expression. Systematic identification and annotation of TFs, followed by construction of TF databases may serve as u...
Anyuan Guo, Xin Chen, Ge Gao, He Zhang, Qihui Zhu,...