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    » A friendly statistics package for microarray analysis
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    BMCBI
    2006
    146views more  BMCBI 2006»
    GeneTools - application for functional annotation and statistical hypothesis testing
    13 years 6 months ago
    GeneTools - application for functional annotation and statistical hypothesis testing
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    Background: Modern biology has shifted from "one gene" approaches to methods for genomic-scale analysis like microarray technology, which allow simultaneous measurement ...
    Vidar Beisvag, Frode K. R. Jünge, Hallgeir Be...
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    BIOINFORMATICS
    2010
    170views more  BIOINFORMATICS 2010»
    Joint estimation of DNA copy number from multiple platforms
    13 years 6 months ago
    Joint estimation of DNA copy number from multiple platforms
    Download  www-stat.stanford.edu
    DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
    Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li
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    BMCBI
    2006
    146views more  BMCBI 2006»
    A database application for pre-processing, storage and comparison of mass spectra derived from patients and controls
    13 years 6 months ago
    A database application for pre-processing, storage and comparison of mass spectra derived from patients and controls
    Download  www.biomedcentral.com
    Background: Statistical comparison of peptide profiles in biomarker discovery requires fast, userfriendly software for high throughput data analysis. Important features are flexib...
    Mark K. Titulaer, Ivar Siccama, Lennard J. Dekker,...
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    BMCBI
    2008
    155views more  BMCBI 2008»
    Extending pathways based on gene lists using InterPro domain signatures
    13 years 6 months ago
    Extending pathways based on gene lists using InterPro domain signatures
    Download  www.biomedcentral.com
    Background: High-throughput technologies like functional screens and gene expression analysis produce extended lists of candidate genes. Gene-Set Enrichment Analysis is a commonly...
    Florian Hahne, Alexander Mehrle, Dorit Arlt, Annem...
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    BMCBI
    2007
    146views more  BMCBI 2007»
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    13 years 6 months ago
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    Download  www.biomedcentral.com
    Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
    Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
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