Sciweavers

24 search results - page 1 / 5
» A genotype calling algorithm for affymetrix SNP arrays
Sort
View
BIOINFORMATICS
2006
71views more  BIOINFORMATICS 2006»
13 years 4 months ago
A genotype calling algorithm for affymetrix SNP arrays
Nusrat Rabbee, Terence P. Speed
BMCBI
2010
89views more  BMCBI 2010»
13 years 5 months ago
Spatial normalization improves the quality of genotype calling for Affymetrix SNP 6.0 arrays
Background: Microarray measurements are susceptible to a variety of experimental artifacts, some of which give rise to systematic biases that are spatially dependent in a unique w...
High-Seng Chai, Terry M. Therneau, Kent R. Bailey,...
BMCBI
2007
94views more  BMCBI 2007»
13 years 5 months ago
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays
Background: Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlyi...
Philippe Lamy, Claus L. Andersen, Lars Dyrskjot, N...
BMCBI
2008
181views more  BMCBI 2008»
13 years 3 months ago
Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270
Background: Genome-wide association studies (GWAS) aim to identify genetic variants (usually single nucleotide polymorphisms [SNPs]) across the entire human genome that are associ...
Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming M. ...