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» A hybrid genetic search for multiple sequence alignment
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TJS
2002
160views more  TJS 2002»
13 years 5 months ago
Adaptive Optimizing Compilers for the 21st Century
Historically, compilers have operated by applying a fixed set of optimizations in a predetermined order. We call such an ordered list of optimizations a compilation sequence. This...
Keith D. Cooper, Devika Subramanian, Linda Torczon
BMCBI
2006
130views more  BMCBI 2006»
13 years 5 months ago
An interactive visualization tool to explore the biophysical properties of amino acids and their contribution to substitution ma
Background: Quantitative descriptions of amino acid similarity, expressed as probabilistic models of evolutionary interchangeability, are central to many mainstream bioinformatic ...
Blazej Bulka, Marie desJardins, Stephen J. Freelan...
SC
2009
ACM
14 years 12 days ago
Automating the generation of composed linear algebra kernels
Memory bandwidth limits the performance of important kernels in many scientific applications. Such applications often use sequences of Basic Linear Algebra Subprograms (BLAS), an...
Geoffrey Belter, Elizabeth R. Jessup, Ian Karlin, ...
BMCBI
2007
165views more  BMCBI 2007»
13 years 5 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf
MIR
2010
ACM
207views Multimedia» more  MIR 2010»
13 years 4 months ago
Learning to rank for content-based image retrieval
In Content-based Image Retrieval (CBIR), accurately ranking the returned images is of paramount importance, since users consider mostly the topmost results. The typical ranking st...
Fabio F. Faria, Adriano Veloso, Humberto Mossri de...