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    BMCBI
    2008
    146views more  BMCBI 2008»
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
    13 years 4 months ago
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
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    Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
    Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
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    BMCBI
    2010
    92views more  BMCBI 2010»
    Integrating gene expression and GO classification for PCA by preclustering
    13 years 4 months ago
    Integrating gene expression and GO classification for PCA by preclustering
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    Background: Gene expression data can be analyzed by summarizing groups of individual gene expression profiles based on GO annotation information. The mean expression profile per g...
    Jorn R. de Haan, Ester Piek, René C. van Sc...
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    BMCBI
    2006
    122views more  BMCBI 2006»
    Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
    13 years 4 months ago
    Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
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    Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
    Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
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    SDM
    2004
    SIAM
    187views Data Mining» more  SDM 2004»
    Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
    13 years 6 months ago
    Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
    Download  www.cs.utexas.edu
    Microarray experiments have been extensively used for simultaneously measuring DNA expression levels of thousands of genes in genome research. A key step in the analysis of gene e...
    Hyuk Cho, Inderjit S. Dhillon, Yuqiang Guan, Suvri...
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    BMCBI
    2008
    202views more  BMCBI 2008»
    Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
    13 years 4 months ago
    Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
    Download  www.biomedcentral.com
    Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
    Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
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