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    BMCBI
    2010
    100views more  BMCBI 2010»
    A robust method for estimating gene expression states using Affymetrix microarray probe level data
    13 years 5 months ago
    A robust method for estimating gene expression states using Affymetrix microarray probe level data
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    Background: Microarray technology is a high-throughput method for measuring the expression levels of thousand of genes simultaneously. The observed intensities combine a non-speci...
    Megu Ohtaki, Keiko Otani, Keiko Hiyama, Naomi Kame...
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    BMCBI
    2008
    98views more  BMCBI 2008»
    Empirical Bayes models for multiple probe type microarrays at the probe level
    13 years 5 months ago
    Empirical Bayes models for multiple probe type microarrays at the probe level
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    Background: When analyzing microarray data a primary objective is often to find differentially expressed genes. With empirical Bayes and penalized t-tests the sample variances are...
    Magnus Åstrand, Petter Mostad, Mats Rudemo
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    BMCBI
    2005
    144views more  BMCBI 2005»
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
    13 years 4 months ago
    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
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    Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
    Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
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    BMCBI
    2007
    132views more  BMCBI 2007»
    Analysis of probe level patterns in Affymetrix microarray data
    13 years 5 months ago
    Analysis of probe level patterns in Affymetrix microarray data
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    Background: Microarrays have been used extensively to analyze the expression profiles for thousands of genes in parallel. Most of the widely used methods for analyzing Affymetrix ...
    Alexander C. Cambon, Abdelnaby Khalyfa, Nigel G. F...
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    BMCBI
    2006
    114views more  BMCBI 2006»
    Empirical validation of the S-Score algorithm in the analysis of gene expression data
    13 years 5 months ago
    Empirical validation of the S-Score algorithm in the analysis of gene expression data
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    Background: Current methods of analyzing Affymetrix GeneChip
    Richard E. Kennedy, Kellie J. Archer, Michael F. M...
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