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BMCBI
2006
114views more  BMCBI 2006»
13 years 5 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
ICIP
2009
IEEE
13 years 3 months ago
A hierarchical graph-based markovian clustering approach for the unsupervised segmentation of textured color images
In this paper, a new unsupervised hierarchical approach to textured color images segmentation is proposed. To this end, we have designed a two-step procedure based on a grey-scale...
Rachid Hedjam, Max Mignotte
BMCBI
2006
136views more  BMCBI 2006»
13 years 5 months ago
EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences
Background: Understanding gene regulatory networks has become one of the central research problems in bioinformatics. More than thirty algorithms have been proposed to identify DN...
Jianjun Hu, Yifeng D. Yang, Daisuke Kihara
BMCBI
2010
190views more  BMCBI 2010»
13 years 5 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...