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BMCBI
2006
166views more  BMCBI 2006»
13 years 5 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2004
228views more  BMCBI 2004»
13 years 5 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
SIGSOFT
2009
ACM
14 years 6 months ago
Asserting and checking determinism for multithreaded programs
The trend towards processors with more and more parallel cores is increasing the need for software that can take advantage of parallelism. The most widespread method for writing p...
Jacob Burnim, Koushik Sen
PLDI
2009
ACM
14 years 17 days ago
PetaBricks: a language and compiler for algorithmic choice
It is often impossible to obtain a one-size-fits-all solution for high performance algorithms when considering different choices for data distributions, parallelism, transformati...
Jason Ansel, Cy P. Chan, Yee Lok Wong, Marek Olsze...
KBSE
2007
IEEE
14 years 1 days ago
Unit testing concurrent software
There are many difficulties associated with developing correct multithreaded software, and many of the activities that are simple for single threaded software are exceptionally ha...
William Pugh, Nathaniel Ayewah