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ICS
2009
Tsinghua U.
13 years 11 months ago
/scratch as a cache: rethinking HPC center scratch storage
To sustain emerging data-intensive scientific applications, High Performance Computing (HPC) centers invest a notable fraction of their operating budget on a specialized fast sto...
Henry M. Monti, Ali Raza Butt, Sudharshan S. Vazhk...
CC
2006
Springer
124views System Software» more  CC 2006»
13 years 8 months ago
Polyhedral Code Generation in the Real World
The polyhedral model is known to be a powerful framework to reason about high level loop transformations. Recent developments in optimizing compilers broke some generally accepted ...
Nicolas Vasilache, Cédric Bastoul, Albert C...
KDD
2003
ACM
152views Data Mining» more  KDD 2003»
14 years 5 months ago
Interactive exploration of coherent patterns in time-series gene expression data
Discovering coherent gene expression patterns in time-series gene expression data is an important task in bioinformatics research and biomedical applications. In this paper, we pr...
Daxin Jiang, Jian Pei, Aidong Zhang
ICSM
2007
IEEE
13 years 11 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
CCGRID
2006
IEEE
13 years 11 months ago
Statistical Properties of Task Running Times in a Global-Scale Grid Environment
— Over the years, the use of global grid environments have become widespread. In order to make applications robust against the dynamics of those grid environments it is essential...
Menno Dobber, Robert D. van der Mei, Ger Koole