7 search results - page 1 / 2 » Accelerating HMMER on GPUs by implementing hybrid data and t... |
BCB
2010
12 years 11 months ago
2010
Many biologically motivated problems are expressed as dynamic programming recurrences and are difficult to parallelize due to the intrinsic data dependencies in their algorithms. ...
IEEEHPCS
2010
13 years 3 months ago
2010
Abstract—GPUs have recently been used to accelerate dataparallel applications for they provide easier programmability and increased generality while maintaining the tremendous me...
DAC
2010
ACM
13 years 4 months ago
2010
ACM
Leveraging the power of nowadays graphics processing units for robust power grid simulation remains a challenging task. Existing preconditioned iterative methods that require inco...
ICPADS
2010
IEEE
13 years 2 months ago
2010
IEEE
To fully tap into the potential of heterogeneous machines composed of multicore processors and multiple accelerators, simple offloading approaches in which the main trunk of the ap...
JCPHY
2011
12 years 7 months ago
2011
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...