63 search results - page 1 / 13 » Accelerating Large Graph Algorithms on the GPU Using CUDA |
HIPC
2007
Springer
13 years 10 months ago
2007
Springer
Abstract. Large graphs involving millions of vertices are common in many practical applications and are challenging to process. Practical-time implementations using high-end comput...
BMCBI
2008
13 years 4 months ago
2008
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
INTENSIVE
2009
IEEE
13 years 11 months ago
2009
IEEE
In this paper an optimized k-means implementation on the graphics processing unit (GPU) is presented. NVIDIA’s Compute Unified Device Architecture (CUDA), available from the G8...
IPPS
2009
IEEE
13 years 11 months ago
2009
IEEE
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
EGH
2009
Springer
13 years 2 months ago
2009
Springer
Graphics Processor Units are used for many general purpose processing due to high compute power available on them. Regular, data-parallel algorithms map well to the SIMD architect...