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» Affine Grassmann codes
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CASES
2003
ACM
13 years 11 months ago
Exploiting bank locality in multi-bank memories
Bank locality can be defined as localizing the number of load/store accesses to a small set of memory banks at a given time. An optimizing compiler can modify a given input code t...
Guilin Chen, Mahmut T. Kandemir, Hendra Saputra, M...
BMCBI
2007
265views more  BMCBI 2007»
13 years 5 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
BMCBI
2005
122views more  BMCBI 2005»
13 years 5 months ago
Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein
Background: Recognition codes for protein-DNA interactions typically assume that the interacting positions contribute additively to the binding energy. While this is known to not ...
Jiajian Liu, Gary D. Stormo