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GECCO
2006
Springer
282views Optimization» more  GECCO 2006»
13 years 9 months ago
A genetic algorithm for the longest common subsequence problem
A genetic algorithm for the longest common subsequence problem encodes candidate sequences as binary strings that indicate subsequences of the shortest or first string. Its fitnes...
Brenda Hinkemeyer, Bryant A. Julstrom
CPM
2007
Springer
185views Combinatorics» more  CPM 2007»
13 years 12 months ago
Algorithms for Computing the Longest Parameterized Common Subsequence
In this paper, we revisit the classic and well-studied longest common subsequence (LCS) problem and study some new variants, first introduced and studied by Rahman and Iliopoulos ...
Costas S. Iliopoulos, Marcin Kubica, M. Sohel Rahm...
IPPS
2003
IEEE
13 years 11 months ago
A BSP/CGM Algorithm for the All-Substrings Longest Common Subsequence Problem
Given two strings and of lengths Ñ and Ò, respectively, the all-substrings longest common subsequence (ALCS) problem obtains the lengths of the subsequences common to and any su...
Carlos E. R. Alves, Edson Cáceres, Siang W....
PDP
2003
IEEE
13 years 11 months ago
A Coarse-Grained Multicomputer Algorithm for the Longest Common Subsequence Problem
The paper presents a Coarse-Grained Multicomputer algorithm that solves the Longest Common Subsequence Problem. This algorithm can be implemented in the CGM with È processors in ...
Thierry Garcia, Jean Frédéric Myoupo...
IFIP
2004
Springer
13 years 11 months ago
Efficient Algorithms for Handling Molecular Weighted Sequences
Abstract In this paper we introduce the Weighted Suffix Tree, an efficient data structure for computing string regularities in weighted sequences of molecular data. Molecular Wei...
Costas S. Iliopoulos, Christos Makris, Yannis Pana...