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BMCBI
2010
132views more  BMCBI 2010»
13 years 5 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...
BMCBI
2007
187views more  BMCBI 2007»
13 years 5 months ago
BioWMS: a web-based Workflow Management System for bioinformatics
Background: An in-silico experiment can be naturally specified as a workflow of activities implementing, in a standardized environment, the process of data and control analysis. A...
Ezio Bartocci, Flavio Corradini, Emanuela Merelli,...
NIPS
2004
13 years 7 months ago
Hierarchical Eigensolver for Transition Matrices in Spectral Methods
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
Chakra Chennubhotla, Allan D. Jepson
CF
2009
ACM
14 years 9 days ago
Mapping the LU decomposition on a many-core architecture: challenges and solutions
Recently, multi-core architectures with alternative memory subsystem designs have emerged. Instead of using hardwaremanaged cache hierarchies, they employ software-managed embedde...
Ioannis E. Venetis, Guang R. Gao
ICS
2004
Tsinghua U.
13 years 11 months ago
CQoS: a framework for enabling QoS in shared caches of CMP platforms
Cache hierarchies have been traditionally designed for usage by a single application, thread or core. As multi-threaded (MT) and multi-core (CMP) platform architectures emerge and...
Ravi R. Iyer