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» An Interactive Visualisation for Investigating DNA Sequence ...
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BMCBI
2007
147views more  BMCBI 2007»
13 years 5 months ago
Comparative analysis of long DNA sequences by per element information content using different contexts
Background: Features of a DNA sequence can be found by compressing the sequence under a suitable model; good compression implies low information content. Good DNA compression mode...
Trevor I. Dix, David R. Powell, Lloyd Allison, Jul...
BMCBI
2006
118views more  BMCBI 2006»
13 years 5 months ago
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
BMCBI
2004
120views more  BMCBI 2004»
13 years 5 months ago
Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information
Background: Expression microarrays are increasingly used to characterize environmental responses and hostparasite interactions for many different organisms. Probe selection for cD...
Yian A. Chen, David J. Mckillen, Shuyuan Wu, Matth...
DBSEC
2010
129views Database» more  DBSEC 2010»
13 years 6 months ago
Secure Outsourcing of DNA Searching via Finite Automata
This work treats the problem of error-resilient DNA searching via oblivious evaluation of finite automata, formulated as follows: a client has a DNA sequence, and a service provid...
Marina Blanton, Mehrdad Aliasgari
BMCBI
2004
146views more  BMCBI 2004»
13 years 5 months ago
The InDeVal insertion/deletion evaluation tool: a program for finding target regions in DNA sequences and for aiding in sequence
Background: The program InDeVal was originally developed to help researchers find known regions of insertion/deletion activity (with the exception of isolated single-base indels) ...
Sierra D. Stoneberg Holt, Jason A. Holt