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» An algorithm for baseline correction of MALDI mass spectra
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ACMSE
2005
ACM
13 years 6 months ago
An algorithm for baseline correction of MALDI mass spectra
Visualization and differentiation of proteins in tissue are problems of increasing interest in computational systems biology, bioinformatics, and image processing. A platform for ...
Betsy Williams, Shannon Cornett, Benoit M. Dawant,...
DATESO
2010
169views Database» more  DATESO 2010»
13 years 2 months ago
Parametrised Hausdorff Distance as a Non-Metric Similarity Model for Tandem Mass Spectrometry
Abstract. Tandem mass spectrometry is a widely used method for protein and peptide sequences identification. Since the mass spectra contain up to 80% of noise and many other inaccu...
Jiri Novák, David Hoksza
BMCBI
2010
96views more  BMCBI 2010»
13 years 4 months ago
FluTyper-an algorithm for automated typing and subtyping of the influenza virus from high resolution mass spectral data
Background: High resolution mass spectrometry has been employed to rapidly and accurately type and subtype influenza viruses. The detection of signature peptides with unique theor...
Jason W. H. Wong, Alexander B. Schwahn, Kevin M. D...
GECCO
2005
Springer
218views Optimization» more  GECCO 2005»
13 years 10 months ago
Particle swarm optimization for analysis of mass spectral serum profiles
Serum profiling using mass spectrometry is an emerging technology with a great potential to provide biomarkers for complex diseases such as cancer. However, protein profiles obtai...
Habtom W. Ressom, Rency S. Varghese, Daniel Saha, ...
SIGIR
2009
ACM
13 years 11 months ago
Protein identification as an information retrieval problem
We present the first interdisciplinary work on transforming a popular problem in proteomics, i.e. protein identification from tandem mass spectra, to an Information Retrieval (IR)...
Yiming Yang, Subramaniam Ganapathy, Abhay Harpale