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ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
13 years 5 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
ACTA
2000
302views more  ACTA 2000»
13 years 5 months ago
Efficiently building a parse tree from a regular expression
We show in this paper that parsing with regular expressions instead of context-free grammars, when it is possible, is desirable. We present efficient algorithms for performing diff...
Danny Dubé, Marc Feeley
IANDC
2011
148views more  IANDC 2011»
13 years 23 days ago
Building species trees from larger parts of phylogenomic databases
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
JMLR
2010
170views more  JMLR 2010»
13 years 4 months ago
A Streaming Parallel Decision Tree Algorithm
A new algorithm for building decision tree classifiers is proposed. The algorithm is executed in a distributed environment and is especially designed for classifying large datase...
Yael Ben-Haim, Elad Tom-Tov
PPSN
2004
Springer
13 years 11 months ago
Distribution Tree-Building Real-Valued Evolutionary Algorithm
This article describes a new model of probability density function and its use in estimation of distribution algorithms. The new model, the distribution tree, has interesting prope...
Petr Posik