We extend the binary search technique to searching in trees. We consider two models of queries: questions about vertices and questions about edges. We present a general approach t...
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
We present an algorithm for partial order reduction in the context of a countable universe of deterministic actions, of which finitely many are enabled at any given state. This mea...
Ontologies represent data relationships as hierarchies of possibly overlapping classes. Ontologies are closely related to clustering hierarchies, and in this article we explore th...
Jinze Liu, Qi Zhang, Wei Wang 0010, Leonard McMill...
—Protein identification is a key and essential step in mass spectrometry (MS) based proteome research. To date, there are many protein identification strategies that employ eithe...