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IPL
2010
117views more  IPL 2010»
12 years 11 months ago
An improved algorithm for sorting by block-interchanges based on permutation groups
Yen-Lin Huang, Cheng-Chen Huang, Chuan Yi Tang, Ch...
SPAA
1996
ACM
13 years 8 months ago
From AAPC Algorithms to High Performance Permutation Routing and Sorting
Several recent papers have proposed or analyzed optimal algorithms to route all-to-all personalizedcommunication (AAPC) over communication networks such as meshes, hypercubes and ...
Thomas Stricker, Jonathan C. Hardwick
IPL
2008
86views more  IPL 2008»
13 years 4 months ago
A more efficient algorithm for perfect sorting by reversals
We describe a new algorithm for the problem of perfect sorting a signed permutation by reversals. The worst-case time complexity of this algorithm is parameterized by the maximum p...
Sèverine Bérard, Cedric Chauve, Chri...
IPL
2006
80views more  IPL 2006»
13 years 4 months ago
BubbleSearch: A simple heuristic for improving priority-based greedy algorithms
We introduce BubbleSearch, a general approach for extending priority-based greedy heuristics. Following the framework recently developed by Borodin et al., we consider priority al...
Neal Lesh, Michael Mitzenmacher
BMCBI
2008
138views more  BMCBI 2008»
13 years 4 months ago
Methods for simultaneously identifying coherent local clusters with smooth global patterns in gene expression profiles
Background: The hierarchical clustering tree (HCT) with a dendrogram [1] and the singular value decomposition (SVD) with a dimension-reduced representative map [2] are popular met...
Yin-Jing Tien, Yun-Shien Lee, Han-Ming Wu, Chun-Ho...