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IJBRA
2008
101views more  IJBRA 2008»
13 years 5 months ago
Analysing formal models of genetic regulatory networks with delays
: In this paper, we propose a refinement of the modelling of biological regulatory networks based on the discrete approach of Ren
Jamil Ahmad, Olivier Roux, Gilles Bernot, Jean-Pau...
FORMATS
2007
Springer
13 years 11 months ago
On Timed Models of Gene Networks
Abstract. We present a systematic translation from timed models of genetic regulatory networks into products of timed automata to which one can apply verification tools in order l...
Grégory Batt, Ramzi Ben Salah, Oded Maler
JCB
2002
131views more  JCB 2002»
13 years 4 months ago
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...
Hidde de Jong
TSMC
2010
12 years 11 months ago
On Robust Stability of Stochastic Genetic Regulatory Networks With Time Delays: A Delay Fractioning Approach
Robust stability serves as an important regulation mechanism in system biology and synthetic biology. In this paper, the robust stability analysis problem is investigated for a cla...
Yao Wang, Zidong Wang, Jinling Liang
TCS
2008
13 years 4 months ago
Temporal constraints in the logical analysis of regulatory networks
Starting from the logical description of gene regulatory networks developed by R. Thomas, we introduce an enhanced modelling approach based on timed automata. We obtain a refined ...
Heike Siebert, Alexander Bockmayr