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BMCBI
2008
104views more  BMCBI 2008»
13 years 4 months ago
Analyzing the simplicial decomposition of spatial protein structures
Background: The fast growing Protein Data Bank contains the three-dimensional description of more than 45000 protein- and nucleic-acid structures today. The large majority of the ...
Rafael Ördög, Zoltan Szabadka, Vince Gro...
IWANN
2009
Springer
13 years 11 months ago
On the Bond Graphs in the Delaunay-Tetrahedra of the Simplicial Decomposition of Spatial Protein Structures
The examination of straightforwardly definable discrete structures in nucleic acids and proteins turned out to be perhaps the most important development in our present knowledge a...
Rafael Ördög, Vince Grolmusz
ADC
2006
Springer
158views Database» more  ADC 2006»
13 years 10 months ago
Dimensionality reduction in patch-signature based protein structure matching
Searching bio-chemical structures is becoming an important application domain of information retrieval. This paper introduces a protein structure matching problem and formulates i...
Zi Huang, Xiaofang Zhou, Dawei Song, Peter Bruza
ICDE
2012
IEEE
202views Database» more  ICDE 2012»
11 years 7 months ago
Differentially Private Spatial Decompositions
— Differential privacy has recently emerged as the de facto standard for private data release. This makes it possible to provide strong theoretical guarantees on the privacy and ...
Graham Cormode, Cecilia M. Procopiuc, Divesh Sriva...
CIKM
2006
Springer
13 years 8 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...