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    BMCBI
    2005
    107views more  BMCBI 2005»
    Identifying differential expression in multiple SAGE libraries: an overdispersed log-linear model approach
    13 years 5 months ago
    Identifying differential expression in multiple SAGE libraries: an overdispersed log-linear model approach
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    Background: In testing for differential gene expression involving multiple serial analysis of gene expression (SAGE) libraries, it is critical to account for both between and with...
    Jun Lu, John K. Tomfohr, Thomas B. Kepler
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    BMCBI
    2005
    155views more  BMCBI 2005»
    Mining protein function from text using term-based support vector machines
    13 years 5 months ago
    Mining protein function from text using term-based support vector machines
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    Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
    Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
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    BMCBI
    2007
    113views more  BMCBI 2007»
    miRAS: a data processing system for miRNA expression profiling study
    13 years 5 months ago
    miRAS: a data processing system for miRNA expression profiling study
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    Background: The study of microRNAs (miRNAs) is attracting great considerations. Recent studies revealed that miRNAs play as important regulators of gene expression and some even a...
    Feng Tian, Huayue Zhang, Xinyu Zhang, Chi Song, Yo...
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    NAR
    2008
    204views more  NAR 2008»
    ppdb: a plant promoter database
    13 years 5 months ago
    ppdb: a plant promoter database
    Download  www1.gifu-u.ac.jp
    ppdb (http://www.ppdb.gene.nagoya-u.ac.jp) is a plant promoter database that provides promoter annotation of Arabidopsis and rice. The database contains information on promoter st...
    Yoshiharu Y. Yamamoto, Junichi Obokata
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    BMCBI
    2004
    126views more  BMCBI 2004»
    A probabilistic model for the evolution of RNA structure
    13 years 5 months ago
    A probabilistic model for the evolution of RNA structure
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    Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
    Ian Holmes
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