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» Appearance Normalization of Histology Slides
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MICCAI
2010
Springer
13 years 2 months ago
Appearance Normalization of Histology Slides
Abstract. This paper presents a method for automatic color and intensity normalization of digitized histology slides stained with two different agents. In comparison to previous a...
Marc Niethammer, David Borland, J. S. Marron, John...
BMCBI
2011
12 years 11 months ago
Appearance frequency modulated gene set enrichment testing
Background: Gene set enrichment testing has helped bridge the gap from an individual gene to a systems biology interpretation of microarray data. Although gene sets are defined a ...
Jun Ma, Maureen A. Sartor, H. V. Jagadish
BMCBI
2005
113views more  BMCBI 2005»
13 years 4 months ago
Microarray scanner calibration curves: characteristics and implications
Background: Microarray-based measurement of mRNA abundance assumes a linear relationship between the fluorescence intensity and the dye concentration. In reality, however, the cal...
Leming M. Shi, Weida Tong, Zhenqiang Su, Tao Han, ...
BMCBI
2004
131views more  BMCBI 2004»
13 years 4 months ago
Detection of chromosomal regions showing differential gene expression in human skeletal muscle and in alveolar rhabdomyosarcoma
Background: Rhabdomyosarcoma is a relatively common tumour of the soft tissue, probably due to regulatory disruption of growth and differentiation of skeletal muscle stem cells. I...
Andrea Bisognin, Stefania Bortoluzzi, Gian Antonio...