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» Approximate Global Alignment of Sequences
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AINA
2008
IEEE
13 years 11 months ago
Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chua...
BIOINFORMATICS
2010
91views more  BIOINFORMATICS 2010»
13 years 5 months ago
GASSST: global alignment short sequence search tool
Guillaume Rizk, Dominique Lavenier
BIOINFORMATICS
2000
85views more  BIOINFORMATICS 2000»
13 years 5 months ago
VISTA : visualizing global DNA sequence alignments of arbitrary length
Chris Mayor, Michael Brudno, Jody R. Schwartz, Ale...
PAMI
2011
13 years 7 days ago
Approximately Global Optimization for Robust Alignment of Generalized Shapes
—In this paper, we introduce a novel method to solve shape alignment problems. We use gray-scale “images” to represent source shapes, and propose a novel two-component Gaussi...
Hongsheng Li, Tian Shen, Xiaolei Huang