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    » Array2BIO: from microarray expression data to functional ann...
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    NIPS
    2003
    133views Information Technology» more  NIPS 2003»
    ICA-based Clustering of Genes from Microarray Expression Data
    13 years 6 months ago
    ICA-based Clustering of Genes from Microarray Expression Data
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    We propose an unsupervised methodology using independent component analysis (ICA) to cluster genes from DNA microarray data. Based on an ICA mixture model of genomic expression pa...
    Su-In Lee, Serafim Batzoglou
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    BMCBI
    2004
    115views more  BMCBI 2004»
    Quantifying the relationship between co-expression, co-regulation and gene function
    13 years 4 months ago
    Quantifying the relationship between co-expression, co-regulation and gene function
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    Background: It is thought that genes with similar patterns of mRNA expression and genes with similar functions are likely to be regulated via the same mechanisms. It has been diff...
    Dominic J. Allocco, Isaac S. Kohane, Atul J. Butte
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    BMCBI
    2008
    160views more  BMCBI 2008»
    Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
    13 years 4 months ago
    Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'
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    Background: The variety of DNA microarray formats and datasets presently available offers an unprecedented opportunity to perform insightful comparisons of heterogeneous data. Cro...
    Alexandre Kuhn, Ruth Luthi-Carter, Mauro Delorenzi
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    BMCBI
    2008
    259views more  BMCBI 2008»
    DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
    13 years 4 months ago
    DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
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    Background: A typical step in the analysis of gene expression data is the determination of clusters of genes that exhibit similar expression patterns. Researchers are confronted w...
    Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J....
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    BMCBI
    2008
    146views more  BMCBI 2008»
    EST Express: PHP/MySQL based automated annotation of ESTs from expression libraries
    13 years 4 months ago
    EST Express: PHP/MySQL based automated annotation of ESTs from expression libraries
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    Background: Several biological techniques result in the acquisition of functional sets of cDNAs that must be sequenced and analyzed. The emergence of redundant databases such as U...
    Robin P. Smith, William J. Buchser, Marcus B. Lemm...
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