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BMCBI
2004
228views more  BMCBI 2004»
13 years 5 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
BMCBI
2008
121views more  BMCBI 2008»
13 years 5 months ago
Microarray data mining using landmark gene-guided clustering
Background: Clustering is a popular data exploration technique widely used in microarray data analysis. Most conventional clustering algorithms, however, generate only one set of ...
Pankaj Chopra, Jaewoo Kang, Jiong Yang, HyungJun C...
FM
2006
Springer
146views Formal Methods» more  FM 2006»
13 years 9 months ago
Formal Modeling of Communication Protocols by Graph Transformation
Formal modeling is a crucial first step in the analysis of safety critical communication protocols such as IP Telephony. These protocols are notoriously resistant to formal modelin...
Zarrin Langari, Richard J. Trefler
ASPLOS
2008
ACM
13 years 7 months ago
Optimistic parallelism benefits from data partitioning
Recent studies of irregular applications such as finite-element mesh generators and data-clustering codes have shown that these applications have a generalized data parallelism ar...
Milind Kulkarni, Keshav Pingali, Ganesh Ramanaraya...
CIKM
2008
Springer
13 years 7 months ago
Scalable community discovery on textual data with relations
Every piece of textual data is generated as a method to convey its authors' opinion regarding specific topics. Authors deliberately organize their writings and create links, ...
Huajing Li, Zaiqing Nie, Wang-Chien Lee, C. Lee Gi...