126 search results - page 1 / 26 » Automated Alignment of RNA Sequences to Pseudoknotted Struct... |
ISMB
1997
13 years 5 months ago
1997
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
CSB
2004
IEEE
13 years 8 months ago
2004
IEEE
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
IJBRA
2006
13 years 4 months ago
2006
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...
RECOMB
2006
Springer
14 years 4 months ago
2006
Springer
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseu...
ISAAC
2004
Springer
13 years 9 months ago
2004
Springer
RNA is generally a single-stranded molecule where the bases form hydrogen bonds within the same molecule leading to structure formation. In comparing different homologous RNA mole...