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WS
2010
ACM
13 years 3 months ago
Structured literature image finder: Parsing text and figures in biomedical literature
The SLIF project combines text-mining and image processing to extract structured information from biomedical literature. SLIF extracts images and their captions from published pap...
Amr Ahmed, Andrew Arnold, Luís Pedro Coelho...
BIODATAMINING
2008
120views more  BIODATAMINING 2008»
13 years 5 months ago
Filling the gap between biology and computer science
This editorial introduces BioData Mining, a new journal which publishes research articles related to advances in computational methods and techniques for the extraction of useful ...
Jesús S. Aguilar-Ruiz, Jason H. Moore, Mary...
BMCBI
2008
149views more  BMCBI 2008»
13 years 5 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...
BMCBI
2005
125views more  BMCBI 2005»
13 years 4 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...