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» Automatic Optimization for MapReduce Programs
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IPPS
2008
IEEE
13 years 11 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
FPGA
2007
ACM
150views FPGA» more  FPGA 2007»
13 years 11 months ago
FPGA-friendly code compression for horizontal microcoded custom IPs
Shrinking time-to-market and high demand for productivity has driven traditional hardware designers to use design methodologies that start from high-level languages. However, meet...
Bita Gorjiara, Daniel Gajski
BMCBI
2006
87views more  BMCBI 2006»
13 years 5 months ago
MathDAMP: a package for differential analysis of metabolite profiles
Background: With the advent of metabolomics as a powerful tool for both functional and biomarker discovery, the identification of specific differences between complex metabolite p...
Richard Baran, Hayataro Kochi, Natsumi Saito, Mako...
BMCBI
2005
105views more  BMCBI 2005»
13 years 5 months ago
SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management
Background: Single nucleotide polymorphisms (SNPs) provide an important tool in pinpointing susceptibility genes for complex diseases and in unveiling human molecular evolution. S...
Lin Wang, Simin Liu, Tianhua Niu, Xin Xu
TFM
2009
Springer
252views Formal Methods» more  TFM 2009»
13 years 12 months ago
Abstraction and Modelling: A Complementary Partnership
action and Modelling - a complementary partnership” 10h30 – 11h 00 Coffee break 11h-12h30 Session 1 “Model Transformation: Foundations” Algebraic models for bidirectional m...
Jeffrey Kramer