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» Automatic mining of fruit fly embryo images
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KDD
2006
ACM
142views Data Mining» more  KDD 2006»
14 years 5 months ago
Automatic mining of fruit fly embryo images
We present FEMine, an automatic system for image-based gene expression analysis. We perform experiments on the largest publicly available collection of Drosophila ISH (in situ hyb...
Jia-Yu Pan, André G. R. Balan, Eric P. Xing...
BMCBI
2004
162views more  BMCBI 2004»
13 years 4 months ago
Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...
ISBI
2006
IEEE
14 years 5 months ago
Clustering gene expression patterns of fly embryos
The spatio-temporal patterning of gene expression in early embryos is an important source of information for understanding the functions of genes involved in development. Most ana...
Hanchuan Peng, Fuhui Long, Michael B. Eisen, Eugen...
BILDMED
2009
153views Algorithms» more  BILDMED 2009»
13 years 6 months ago
Automatic Classification of Embryonic Fruit Fly Gene Expression Patterns
Abstract. Carefully studied in-situ hybridization Gene expression patterns (GEP) can provide a first glance at possible relationships among genes. Automatic comparative analysis to...
Andreas Heffel, Sonja J. Prohaska, Peter F. Stadle...
BIOINFORMATICS
2010
116views more  BIOINFORMATICS 2010»
13 years 5 months ago
A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems
Motivation: The fruit fly (Drosophila melanogaster) is a commonly used model organism in biology. We are currently building a 3D digital atlas of the fruit fly larval nervous syst...
Lei Qu, Hanchuan Peng